Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.08□□□□□ -0.32
SCN1BQ07699 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 AC104457.1-201ENST00000401024 814 ntBASIC13.08□□□□□ -0.32
SCN1BQ07699 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SCN1BQ07699 AC015922.1-201ENST00000421102 1152 ntBASIC13.08□□□□□ -0.32
SCN1BQ07699 TREML5P-201ENST00000421694 576 ntBASIC13.08□□□□□ -0.32
SCN1BQ07699 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.08□□□□□ -0.32
SCN1BQ07699 SDHAP3-202ENST00000515467 728 ntBASIC13.08□□□□□ -0.32
SCN1BQ07699 AC015910.1-201ENST00000579400 975 ntBASIC13.08□□□□□ -0.32
SCN1BQ07699 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.08□□□□□ -0.32
SCN1BQ07699 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.08□□□□□ -0.32
SCN1BQ07699 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.08□□□□□ -0.32
SCN1BQ07699 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SCN1BQ07699 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SCN1BQ07699 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.08□□□□□ -0.32
SCN1BQ07699 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SCN1BQ07699 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.08□□□□□ -0.32
SCN1BQ07699 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.08□□□□□ -0.32
SCN1BQ07699 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SCN1BQ07699 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCN1BQ07699 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.07□□□□□ -0.32
SCN1BQ07699 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 TIMM17BP1-201ENST00000545713 516 ntBASIC13.07□□□□□ -0.32
SCN1BQ07699 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.07□□□□□ -0.32
SCN1BQ07699 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AC044860.1-202ENST00000559481 777 ntBASIC13.07□□□□□ -0.32
SCN1BQ07699 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AC010336.2-201ENST00000564226 506 ntBASIC13.07□□□□□ -0.32
SCN1BQ07699 AC140878.1-201ENST00000565277 250 ntBASIC13.07□□□□□ -0.32
SCN1BQ07699 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.07□□□□□ -0.32
SCN1BQ07699 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.07□□□□□ -0.32
SCN1BQ07699 AC074044.1-201ENST00000609673 707 ntBASIC13.07□□□□□ -0.32
SCN1BQ07699 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCN1BQ07699 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.07□□□□□ -0.32
SCN1BQ07699 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SCN1BQ07699 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms