Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SKP1P63208 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SKP1P63208 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SKP1P63208 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.87□□□□□ -0.19
SKP1P63208 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 AC007274.1-201ENST00000439805 662 ntBASIC13.87□□□□□ -0.19
SKP1P63208 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.87□□□□□ -0.19
SKP1P63208 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SKP1P63208 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.87□□□□□ -0.19
SKP1P63208 SORD2P-201ENST00000558556 1069 ntBASIC13.87□□□□□ -0.19
SKP1P63208 AC133540.1-201ENST00000620845 1019 ntBASIC13.87□□□□□ -0.19
SKP1P63208 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.87□□□□□ -0.19
SKP1P63208 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.87□□□□□ -0.19
SKP1P63208 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.87□□□□□ -0.19
SKP1P63208 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SKP1P63208 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 AC006033.1-201ENST00000440505 426 ntBASIC13.86□□□□□ -0.19
SKP1P63208 SERPINA13P-202ENST00000478994 924 ntBASIC13.86□□□□□ -0.19
SKP1P63208 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.86□□□□□ -0.19
SKP1P63208 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.86□□□□□ -0.19
SKP1P63208 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 AP001258.2-201ENST00000529891 490 ntBASIC13.86□□□□□ -0.19
SKP1P63208 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.86□□□□□ -0.19
SKP1P63208 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.86□□□□□ -0.19
SKP1P63208 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.86□□□□□ -0.19
SKP1P63208 AC005324.6-201ENST00000587972 613 ntBASIC13.86□□□□□ -0.19
SKP1P63208 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 BNIP3P13-201ENST00000599968 566 ntBASIC13.86□□□□□ -0.19
SKP1P63208 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
SKP1P63208 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SKP1P63208 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SKP1P63208 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms