Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S2P59780 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 TNRC18P1-201ENST00000502875 3650 ntBASIC12.56□□□□□ -0.4
AP3S2P59780 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.56□□□□□ -0.4
AP3S2P59780 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 AC093525.8-201ENST00000624099 1342 ntBASIC12.56□□□□□ -0.4
AP3S2P59780 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
AP3S2P59780 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.56□□□□□ -0.4
AP3S2P59780 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AP3S2P59780 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
AP3S2P59780 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AP3S2P59780 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
AP3S2P59780 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
AP3S2P59780 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP3S2P59780 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 MARK2P9-201ENST00000430958 1727 ntBASIC12.55□□□□□ -0.4
AP3S2P59780 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.55□□□□□ -0.4
AP3S2P59780 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S2P59780 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S2P59780 UPK3BP1-201ENST00000428678 509 ntBASIC12.55□□□□□ -0.4
AP3S2P59780 ADH5P3-201ENST00000433842 1137 ntBASIC12.55□□□□□ -0.4
AP3S2P59780 MTND6P24-201ENST00000440466 518 ntBASIC12.55□□□□□ -0.4
AP3S2P59780 KRT18P2-201ENST00000447938 1258 ntBASIC12.55□□□□□ -0.4
AP3S2P59780 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.55□□□□□ -0.4
AP3S2P59780 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 AC003101.2-201ENST00000612557 442 ntBASIC12.55□□□□□ -0.4
AP3S2P59780 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S2P59780 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AP3S2P59780 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S2P59780 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.55□□□□□ -0.4
AP3S2P59780 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
AP3S2P59780 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.55□□□□□ -0.4
AP3S2P59780 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP3S2P59780 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 AC131902.2-201ENST00000566892 2172 ntBASIC12.54□□□□□ -0.4
AP3S2P59780 AL355102.3-201ENST00000554299 1678 ntBASIC12.54□□□□□ -0.4
AP3S2P59780 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
AP3S2P59780 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms