Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDKN2DP55273 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKN2DP55273 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDKN2DP55273 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 ST20-AS1-201ENST00000560255 4223 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 ANKRD19P-201ENST00000338192 862 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKN2DP55273 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKN2DP55273 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 AL645933.1-201ENST00000440087 609 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 HOMER2P2-201ENST00000451621 847 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKN2DP55273 CTBP2P5-201ENST00000454986 1264 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 AC100850.1-201ENST00000506768 649 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKN2DP55273 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 MIR4783-201ENST00000580343 82 ntBASIC14.38□□□□□ -0.11
CDKN2DP55273 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDKN2DP55273 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKN2DP55273 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDKN2DP55273 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKN2DP55273 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.37□□□□□ -0.11
CDKN2DP55273 LINC02486-201ENST00000604157 3000 ntBASIC14.37□□□□□ -0.11
CDKN2DP55273 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDKN2DP55273 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2DP55273 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2DP55273 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2DP55273 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKN2DP55273 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.37□□□□□ -0.11
CDKN2DP55273 KLF2P4-201ENST00000451959 1225 ntBASIC14.37□□□□□ -0.11
CDKN2DP55273 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKN2DP55273 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.37□□□□□ -0.11
CDKN2DP55273 KRT17P8-201ENST00000540749 863 ntBASIC14.37□□□□□ -0.11
CDKN2DP55273 DUX4L46-201ENST00000566845 751 ntBASIC14.37□□□□□ -0.11
CDKN2DP55273 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.37□□□□□ -0.11
CDKN2DP55273 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms