Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 CICP17-201ENST00000418553 2377 ntBASIC16.01■□□□□ 0.15
PMS1P54277 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PMS1P54277 CROT-203ENST00000419147 2959 ntTSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 ANKRD19P-201ENST00000338192 862 ntBASIC16.01■□□□□ 0.15
PMS1P54277 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.01■□□□□ 0.15
PMS1P54277 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.01■□□□□ 0.15
PMS1P54277 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.01■□□□□ 0.15
PMS1P54277 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.01■□□□□ 0.15
PMS1P54277 AL355994.2-201ENST00000447882 704 ntBASIC16.01■□□□□ 0.15
PMS1P54277 AL035414.1-201ENST00000451327 857 ntBASIC16.01■□□□□ 0.15
PMS1P54277 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.01■□□□□ 0.15
PMS1P54277 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.01■□□□□ 0.15
PMS1P54277 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PMS1P54277 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.01■□□□□ 0.15
PMS1P54277 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.01■□□□□ 0.15
PMS1P54277 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PMS1P54277 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PMS1P54277 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PMS1P54277 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PMS1P54277 COPE-202ENST00000349893 948 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16■□□□□ 0.15
PMS1P54277 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16■□□□□ 0.15
PMS1P54277 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16■□□□□ 0.15
PMS1P54277 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PMS1P54277 KLF2P1-201ENST00000447438 1042 ntBASIC16■□□□□ 0.15
PMS1P54277 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PMS1P54277 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PMS1P54277 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16■□□□□ 0.15
PMS1P54277 AC100850.1-201ENST00000506768 649 ntBASIC16■□□□□ 0.15
PMS1P54277 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16■□□□□ 0.15
PMS1P54277 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16■□□□□ 0.15
PMS1P54277 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PMS1P54277 AC132192.2-201ENST00000596206 1147 ntBASIC16■□□□□ 0.15
PMS1P54277 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16■□□□□ 0.15
PMS1P54277 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16■□□□□ 0.15
PMS1P54277 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PMS1P54277 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PMS1P54277 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PMS1P54277 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PMS1P54277 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms