Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRPHP41219 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.44■□□□□ 0.22
PRPHP41219 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.44■□□□□ 0.22
PRPHP41219 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PRPHP41219 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 MIR663B-201ENST00000408361 115 ntBASIC16.43■□□□□ 0.22
PRPHP41219 TUBB8P8-201ENST00000458717 1058 ntBASIC16.43■□□□□ 0.22
PRPHP41219 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 AL583810.1-201ENST00000553344 1045 ntBASIC16.43■□□□□ 0.22
PRPHP41219 AL160314.3-201ENST00000556041 767 ntBASIC16.43■□□□□ 0.22
PRPHP41219 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.43■□□□□ 0.22
PRPHP41219 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
PRPHP41219 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.43■□□□□ 0.22
PRPHP41219 AC005324.6-201ENST00000587972 613 ntBASIC16.43■□□□□ 0.22
PRPHP41219 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 AP000346.4-201ENST00000614827 381 ntBASIC16.43■□□□□ 0.22
PRPHP41219 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PRPHP41219 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRPHP41219 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PRPHP41219 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PRPHP41219 KRT8P24-201ENST00000560290 1559 ntBASIC16.43■□□□□ 0.22
PRPHP41219 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRPHP41219 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.42■□□□□ 0.22
PRPHP41219 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 GOLGA2P4-201ENST00000441462 777 ntBASIC16.42■□□□□ 0.22
PRPHP41219 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.42■□□□□ 0.22
PRPHP41219 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.42■□□□□ 0.22
PRPHP41219 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.42■□□□□ 0.22
PRPHP41219 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
PRPHP41219 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.42■□□□□ 0.22
PRPHP41219 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 AC144522.1-201ENST00000625111 1658 ntBASIC16.42■□□□□ 0.22
PRPHP41219 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PRPHP41219 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.42■□□□□ 0.22
PRPHP41219 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PRPHP41219 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRPHP41219 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PRPHP41219 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRPHP41219 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 AL022313.4-201ENST00000562756 2046 ntBASIC16.41■□□□□ 0.22
PRPHP41219 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms