Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 RN7SL23P-201ENST00000484055 275 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 AC093826.1-201ENST00000508655 993 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.17■□□□□ 0.5
COL15A1P39059 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL15A1P39059 AC002472.4-201ENST00000641915 272 ntBASIC18.17■□□□□ 0.5
COL15A1P39059 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 AC021305.1-201ENST00000520656 1514 ntBASIC18.16■□□□□ 0.5
COL15A1P39059 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.16■□□□□ 0.5
COL15A1P39059 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.16■□□□□ 0.5
COL15A1P39059 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
COL15A1P39059 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 AP002414.2-201ENST00000591780 3365 ntBASIC18.16■□□□□ 0.5
COL15A1P39059 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 CTBP2P8-201ENST00000422584 1330 ntBASIC18.16■□□□□ 0.5
COL15A1P39059 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.16■□□□□ 0.5
COL15A1P39059 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL15A1P39059 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COL15A1P39059 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 RNVU1-8-201ENST00000364272 125 ntBASIC18.16■□□□□ 0.5
COL15A1P39059 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.16■□□□□ 0.5
COL15A1P39059 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.16■□□□□ 0.5
COL15A1P39059 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.16■□□□□ 0.5
COL15A1P39059 RN7SL596P-201ENST00000582123 288 ntBASIC18.16■□□□□ 0.5
COL15A1P39059 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
COL15A1P39059 LINC00244-201ENST00000625073 613 ntBASIC18.16■□□□□ 0.5
COL15A1P39059 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.16■□□□□ 0.5
COL15A1P39059 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.16■□□□□ 0.5
COL15A1P39059 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL15A1P39059 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 AC090505.1-201ENST00000430515 1834 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COL15A1P39059 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COL15A1P39059 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 LINC02228-204ENST00000642115 2962 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.15■□□□□ 0.5
COL15A1P39059 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COL15A1P39059 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.15■□□□□ 0.5
COL15A1P39059 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 AQP7P5-201ENST00000428759 1049 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 AQP7P4-201ENST00000447083 1042 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 GNG10P1-201ENST00000452289 199 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 AQP7P2-201ENST00000453967 1041 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.15■□□□□ 0.5
COL15A1P39059 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.15■□□□□ 0.5
COL15A1P39059 IGHV1-12-201ENST00000518307 205 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 KRT8P2-201ENST00000556193 944 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 DNM1P51-201ENST00000558149 522 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 AL021707.6-201ENST00000609212 491 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 AL118522.1-201ENST00000611368 560 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 AQP7P3-201ENST00000624547 1041 ntBASIC18.15■□□□□ 0.5
COL15A1P39059 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COL15A1P39059 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms