Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AL118508.1-201ENST00000613502 2345 ntBASIC14.67□□□□□ -0.06
LTBRP36941 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LTBRP36941 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.67□□□□□ -0.06
LTBRP36941 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.67□□□□□ -0.06
LTBRP36941 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LTBRP36941 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 AC064801.2-201ENST00000625052 1303 ntBASIC14.66□□□□□ -0.06
LTBRP36941 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LTBRP36941 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.66□□□□□ -0.06
LTBRP36941 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
LTBRP36941 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.66□□□□□ -0.06
LTBRP36941 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LTBRP36941 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LTBRP36941 FAM226B-201ENST00000602508 1490 ntBASIC14.66□□□□□ -0.06
LTBRP36941 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LTBRP36941 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
LTBRP36941 AL121949.3-201ENST00000406684 385 ntBASIC14.66□□□□□ -0.06
LTBRP36941 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.66□□□□□ -0.06
LTBRP36941 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.66□□□□□ -0.06
LTBRP36941 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LTBRP36941 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.66□□□□□ -0.06
LTBRP36941 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.66□□□□□ -0.06
LTBRP36941 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.66□□□□□ -0.06
LTBRP36941 AC215219.1-201ENST00000400706 1817 ntBASIC14.66□□□□□ -0.06
LTBRP36941 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LTBRP36941 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LTBRP36941 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.65□□□□□ -0.06
LTBRP36941 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.65□□□□□ -0.06
LTBRP36941 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LTBRP36941 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LTBRP36941 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.65□□□□□ -0.06
LTBRP36941 FAM197Y6-201ENST00000420524 766 ntBASIC14.65□□□□□ -0.06
LTBRP36941 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 ALG1L15P-201ENST00000482834 794 ntBASIC14.65□□□□□ -0.06
LTBRP36941 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC14.65□□□□□ -0.06
LTBRP36941 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.65□□□□□ -0.06
LTBRP36941 AL031673.1-201ENST00000611460 466 ntBASIC14.65□□□□□ -0.06
LTBRP36941 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.65□□□□□ -0.06
LTBRP36941 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 AC232323.1-201ENST00000540724 2099 ntBASIC14.65□□□□□ -0.06
LTBRP36941 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.65□□□□□ -0.06
LTBRP36941 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LTBRP36941 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.65□□□□□ -0.06
LTBRP36941 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.65□□□□□ -0.06
LTBRP36941 MYADML-201ENST00000474610 2147 ntBASIC14.65□□□□□ -0.06
LTBRP36941 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LTBRP36941 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms