Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BAK1P2-201ENST00000532665 631 ntBASIC19.92■□□□□ 0.78
CPS1P31327 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC19.92■□□□□ 0.78
CPS1P31327 BX322562.1-201ENST00000617004 561 ntBASIC19.92■□□□□ 0.78
CPS1P31327 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 AC132872.4-202ENST00000622924 2756 ntBASIC19.91■□□□□ 0.78
CPS1P31327 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 RPL4P6-201ENST00000438116 1304 ntBASIC19.91■□□□□ 0.78
CPS1P31327 LINC00115-201ENST00000473798 1317 ntBASIC19.91■□□□□ 0.78
CPS1P31327 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 RPL13AP3-202ENST00000494676 1473 ntBASIC19.91■□□□□ 0.78
CPS1P31327 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CPS1P31327 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CPS1P31327 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC19.91■□□□□ 0.78
CPS1P31327 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 AC100858.1-201ENST00000514059 1228 ntBASIC19.91■□□□□ 0.78
CPS1P31327 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CPS1P31327 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CPS1P31327 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC19.91■□□□□ 0.78
CPS1P31327 MIR6074-201ENST00000612054 107 ntBASIC19.91■□□□□ 0.78
CPS1P31327 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC19.91■□□□□ 0.78
CPS1P31327 AC079331.1-201ENST00000623200 1200 ntBASIC19.91■□□□□ 0.78
CPS1P31327 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.91■□□□□ 0.78
CPS1P31327 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.91■□□□□ 0.78
CPS1P31327 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CPS1P31327 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.9■□□□□ 0.78
CPS1P31327 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.9■□□□□ 0.78
CPS1P31327 HDGF-202ENST00000368206 960 ntTSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 MIR1226-201ENST00000408658 75 ntBASIC19.9■□□□□ 0.78
CPS1P31327 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.9■□□□□ 0.78
CPS1P31327 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC19.9■□□□□ 0.78
CPS1P31327 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CPS1P31327 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC19.9■□□□□ 0.78
CPS1P31327 AJ011931.1-201ENST00000618749 2492 ntBASIC19.9■□□□□ 0.78
CPS1P31327 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CPS1P31327 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPS1P31327 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.89■□□□□ 0.78
CPS1P31327 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPS1P31327 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CPS1P31327 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.89■□□□□ 0.78
CPS1P31327 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.89■□□□□ 0.78
CPS1P31327 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CPS1P31327 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.89■□□□□ 0.77
CPS1P31327 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.89■□□□□ 0.77
CPS1P31327 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 KRT18P44-201ENST00000416086 1285 ntBASIC19.89■□□□□ 0.77
CPS1P31327 HNRNPA1P10-201ENST00000444945 962 ntBASIC19.89■□□□□ 0.77
CPS1P31327 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC19.89■□□□□ 0.77
CPS1P31327 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC19.89■□□□□ 0.77
CPS1P31327 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC19.89■□□□□ 0.77
CPS1P31327 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.89■□□□□ 0.77
CPS1P31327 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.89■□□□□ 0.77
CPS1P31327 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.89■□□□□ 0.77
CPS1P31327 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CPS1P31327 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms