Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.43□□□□□ -0.26
SHC1P29353 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SHC1P29353 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 TLE1P1-201ENST00000422965 589 ntBASIC13.43□□□□□ -0.26
SHC1P29353 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.43□□□□□ -0.26
SHC1P29353 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 AC079316.1-201ENST00000548397 411 ntBASIC13.43□□□□□ -0.26
SHC1P29353 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
SHC1P29353 MIR4741-201ENST00000579822 90 ntBASIC13.43□□□□□ -0.26
SHC1P29353 PPY2P-201ENST00000582808 702 ntBASIC13.43□□□□□ -0.26
SHC1P29353 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 AC009542.2-202ENST00000619004 1067 ntBASIC13.43□□□□□ -0.26
SHC1P29353 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.43□□□□□ -0.26
SHC1P29353 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHC1P29353 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHC1P29353 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.42□□□□□ -0.26
SHC1P29353 TPT1P11-201ENST00000458482 498 ntBASIC13.42□□□□□ -0.26
SHC1P29353 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.42□□□□□ -0.26
SHC1P29353 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.42□□□□□ -0.26
SHC1P29353 AC131206.1-201ENST00000538078 1211 ntBASIC13.42□□□□□ -0.26
SHC1P29353 AC023310.1-201ENST00000554836 735 ntBASIC13.42□□□□□ -0.26
SHC1P29353 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.42□□□□□ -0.26
SHC1P29353 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.42□□□□□ -0.26
SHC1P29353 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SHC1P29353 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 CICP8-201ENST00000455800 2813 ntBASIC13.42□□□□□ -0.26
SHC1P29353 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.42□□□□□ -0.26
SHC1P29353 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SHC1P29353 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHC1P29353 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SHC1P29353 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms