Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.54□□□□□ -0.4
CD40P25942 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.54□□□□□ -0.4
CD40P25942 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.54□□□□□ -0.4
CD40P25942 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.54□□□□□ -0.4
CD40P25942 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 AC022447.6-201ENST00000515522 438 ntBASIC12.54□□□□□ -0.4
CD40P25942 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 RTN3P1-201ENST00000536295 711 ntBASIC12.54□□□□□ -0.4
CD40P25942 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 SORD2P-201ENST00000558556 1069 ntBASIC12.54□□□□□ -0.4
CD40P25942 AC005586.2-201ENST00000563946 837 ntBASIC12.54□□□□□ -0.4
CD40P25942 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.54□□□□□ -0.4
CD40P25942 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 AF254983.2-201ENST00000612331 135 ntBASIC12.54□□□□□ -0.4
CD40P25942 AC015967.2-201ENST00000624092 234 ntBASIC12.54□□□□□ -0.4
CD40P25942 AC006435.4-201ENST00000625037 234 ntBASIC12.54□□□□□ -0.4
CD40P25942 AL356737.1-201ENST00000634391 234 ntBASIC12.54□□□□□ -0.4
CD40P25942 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.54□□□□□ -0.4
CD40P25942 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.54□□□□□ -0.4
CD40P25942 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.53□□□□□ -0.4
CD40P25942 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CD40P25942 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CD40P25942 LINC01165-201ENST00000445190 1623 ntBASIC12.53□□□□□ -0.4
CD40P25942 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.53□□□□□ -0.4
CD40P25942 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.53□□□□□ -0.4
CD40P25942 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.53□□□□□ -0.4
CD40P25942 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.53□□□□□ -0.4
CD40P25942 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CD40P25942 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.53□□□□□ -0.4
CD40P25942 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.53□□□□□ -0.4
CD40P25942 AC116345.2-201ENST00000512837 523 ntBASIC12.53□□□□□ -0.4
CD40P25942 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.53□□□□□ -0.4
CD40P25942 AC242376.1-201ENST00000559033 726 ntBASIC12.53□□□□□ -0.4
CD40P25942 AC079328.1-201ENST00000560358 952 ntBASIC12.53□□□□□ -0.4
CD40P25942 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.53□□□□□ -0.4
CD40P25942 MIR3907-201ENST00000579424 151 ntBASIC12.53□□□□□ -0.4
CD40P25942 MIR4754-201ENST00000582477 89 ntBASIC12.53□□□□□ -0.4
CD40P25942 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.53□□□□□ -0.4
CD40P25942 AC012044.1-201ENST00000603431 297 ntBASIC12.53□□□□□ -0.4
CD40P25942 AC021016.3-201ENST00000608367 477 ntBASIC12.53□□□□□ -0.4
CD40P25942 MIR6769A-201ENST00000617340 73 ntBASIC12.53□□□□□ -0.4
CD40P25942 AL591471.1-201ENST00000621855 229 ntBASIC12.53□□□□□ -0.4
CD40P25942 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 AL513477.1-201ENST00000602865 2407 ntBASIC12.53□□□□□ -0.4
CD40P25942 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD40P25942 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.53□□□□□ -0.4
CD40P25942 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 AC215219.1-201ENST00000400706 1817 ntBASIC12.53□□□□□ -0.4
CD40P25942 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.53□□□□□ -0.4
CD40P25942 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms