Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.96□□□□□ -0.65
SMIM17P0DL12 AF228730.6-201ENST00000641497 218 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 AC084121.3-201ENST00000641716 218 ntBASIC10.96□□□□□ -0.65
SMIM17P0DL12 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.96□□□□□ -0.66
SMIM17P0DL12 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SMIM17P0DL12 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 FAM58DP-201ENST00000428076 619 ntBASIC10.95□□□□□ -0.66
SMIM17P0DL12 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AP000344.2-201ENST00000512987 629 ntBASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AC099521.2-201ENST00000619354 2036 ntBASIC10.95□□□□□ -0.66
SMIM17P0DL12 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM17P0DL12 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SMIM17P0DL12 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms