Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ROS1P08922 RPSAP31-201ENST00000416648 895 ntBASIC12.59□□□□□ -0.39
ROS1P08922 RPS9P1-201ENST00000419943 583 ntBASIC12.59□□□□□ -0.39
ROS1P08922 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.59□□□□□ -0.39
ROS1P08922 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.59□□□□□ -0.39
ROS1P08922 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.59□□□□□ -0.39
ROS1P08922 MIR3147-201ENST00000577811 66 ntBASIC12.59□□□□□ -0.39
ROS1P08922 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.59□□□□□ -0.39
ROS1P08922 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.59□□□□□ -0.39
ROS1P08922 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.59□□□□□ -0.39
ROS1P08922 AC133540.1-201ENST00000620845 1019 ntBASIC12.59□□□□□ -0.39
ROS1P08922 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ROS1P08922 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.58□□□□□ -0.4
ROS1P08922 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.58□□□□□ -0.4
ROS1P08922 FGFR3P1-201ENST00000449999 601 ntBASIC12.58□□□□□ -0.4
ROS1P08922 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 RN7SL555P-201ENST00000584742 339 ntBASIC12.58□□□□□ -0.4
ROS1P08922 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.58□□□□□ -0.4
ROS1P08922 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 AC126177.1-201ENST00000547829 2218 ntBASIC12.58□□□□□ -0.4
ROS1P08922 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ROS1P08922 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.58□□□□□ -0.4
ROS1P08922 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ROS1P08922 AC074138.1-201ENST00000611182 1303 ntBASIC12.57□□□□□ -0.4
ROS1P08922 ACE3P-201ENST00000423435 1973 ntBASIC12.57□□□□□ -0.4
ROS1P08922 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.57□□□□□ -0.4
ROS1P08922 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.57□□□□□ -0.4
ROS1P08922 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ROS1P08922 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
ROS1P08922 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.57□□□□□ -0.4
ROS1P08922 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 AC242376.1-201ENST00000559033 726 ntBASIC12.57□□□□□ -0.4
ROS1P08922 AC100827.2-201ENST00000563214 1194 ntBASIC12.57□□□□□ -0.4
ROS1P08922 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ROS1P08922 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ROS1P08922 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 PUDPP3-201ENST00000445368 636 ntBASIC12.57□□□□□ -0.4
ROS1P08922 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
ROS1P08922 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ROS1P08922 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.57□□□□□ -0.4
ROS1P08922 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ROS1P08922 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.57□□□□□ -0.4
ROS1P08922 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.57□□□□□ -0.4
ROS1P08922 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms