Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
MMP2P08253 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.59□□□□□ -0.07
MMP2P08253 AL132994.2-201ENST00000603120 687 ntBASIC14.59□□□□□ -0.07
MMP2P08253 AL451050.2-201ENST00000606967 682 ntBASIC14.59□□□□□ -0.07
MMP2P08253 MIR6869-201ENST00000619434 62 ntBASIC14.59□□□□□ -0.07
MMP2P08253 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MMP2P08253 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.59□□□□□ -0.07
MMP2P08253 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.59□□□□□ -0.07
MMP2P08253 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
MMP2P08253 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.59□□□□□ -0.07
MMP2P08253 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MMP2P08253 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.58□□□□□ -0.07
MMP2P08253 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
MMP2P08253 CCT8L1P-201ENST00000465400 1674 ntBASIC14.58□□□□□ -0.07
MMP2P08253 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MMP2P08253 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MMP2P08253 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
MMP2P08253 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MMP2P08253 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MMP2P08253 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.58□□□□□ -0.07
MMP2P08253 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MMP2P08253 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 AL157996.1-201ENST00000624684 2299 ntBASIC14.58□□□□□ -0.08
MMP2P08253 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP2P08253 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP2P08253 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
MMP2P08253 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP2P08253 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP2P08253 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.58□□□□□ -0.08
MMP2P08253 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP2P08253 AC092658.1-201ENST00000505836 891 ntBASIC14.58□□□□□ -0.08
MMP2P08253 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP2P08253 AC013355.1-201ENST00000562625 723 ntBASIC14.58□□□□□ -0.08
MMP2P08253 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP2P08253 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.58□□□□□ -0.08
MMP2P08253 RN7SL219P-201ENST00000582872 296 ntBASIC14.58□□□□□ -0.08
MMP2P08253 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
MMP2P08253 AP002353.1-201ENST00000528257 1599 ntBASIC14.58□□□□□ -0.08
MMP2P08253 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.58□□□□□ -0.08
MMP2P08253 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.58□□□□□ -0.08
MMP2P08253 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MMP2P08253 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MMP2P08253 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 USP17L6P-201ENST00000382470 1197 ntBASIC14.57□□□□□ -0.08
MMP2P08253 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.57□□□□□ -0.08
MMP2P08253 AC006033.1-201ENST00000440505 426 ntBASIC14.57□□□□□ -0.08
MMP2P08253 AC106794.1-201ENST00000506935 792 ntBASIC14.57□□□□□ -0.08
MMP2P08253 MARK2P5-201ENST00000507649 634 ntBASIC14.57□□□□□ -0.08
MMP2P08253 AC005740.2-201ENST00000511085 419 ntBASIC14.57□□□□□ -0.08
MMP2P08253 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP2P08253 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.57□□□□□ -0.08
MMP2P08253 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.57□□□□□ -0.08
MMP2P08253 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP2P08253 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.57□□□□□ -0.08
MMP2P08253 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP2P08253 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms