Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD3DP04234 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.4□□□□□ -0.42
CD3DP04234 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.4□□□□□ -0.42
CD3DP04234 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.4□□□□□ -0.42
CD3DP04234 MIR940-201ENST00000401276 94 ntBASIC12.4□□□□□ -0.42
CD3DP04234 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.4□□□□□ -0.42
CD3DP04234 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
CD3DP04234 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.4□□□□□ -0.42
CD3DP04234 AC044860.1-202ENST00000559481 777 ntBASIC12.4□□□□□ -0.42
CD3DP04234 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.4□□□□□ -0.42
CD3DP04234 AC138761.1-201ENST00000584393 385 ntBASIC12.4□□□□□ -0.42
CD3DP04234 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 AL596442.2-201ENST00000610240 980 ntBASIC12.4□□□□□ -0.42
CD3DP04234 AC120114.3-201ENST00000611923 658 ntBASIC12.4□□□□□ -0.42
CD3DP04234 SPDYE12P-201ENST00000618416 771 ntBASIC12.4□□□□□ -0.42
CD3DP04234 AP001059.3-201ENST00000619053 235 ntBASIC12.4□□□□□ -0.42
CD3DP04234 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.4□□□□□ -0.42
CD3DP04234 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.4□□□□□ -0.42
CD3DP04234 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.4□□□□□ -0.42
CD3DP04234 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD3DP04234 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CD3DP04234 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.4□□□□□ -0.42
CD3DP04234 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD3DP04234 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
CD3DP04234 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
CD3DP04234 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD3DP04234 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.4□□□□□ -0.43
CD3DP04234 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD3DP04234 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 AL928654.5-201ENST00000624831 2501 ntBASIC12.39□□□□□ -0.43
CD3DP04234 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.39□□□□□ -0.43
CD3DP04234 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.39□□□□□ -0.43
CD3DP04234 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.39□□□□□ -0.43
CD3DP04234 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 AC139712.1-201ENST00000378256 1875 ntBASIC12.39□□□□□ -0.43
CD3DP04234 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.39□□□□□ -0.43
CD3DP04234 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.39□□□□□ -0.43
CD3DP04234 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD3DP04234 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms