Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APOA1P02647 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 AL355306.1-201ENST00000415580 579 ntBASIC13.06□□□□□ -0.32
APOA1P02647 AL671277.1-201ENST00000429656 993 ntBASIC13.06□□□□□ -0.32
APOA1P02647 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.06□□□□□ -0.32
APOA1P02647 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.06□□□□□ -0.32
APOA1P02647 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.06□□□□□ -0.32
APOA1P02647 AC106730.1-201ENST00000566722 1090 ntBASIC13.06□□□□□ -0.32
APOA1P02647 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 SAMD11P1-201ENST00000571429 661 ntBASIC13.06□□□□□ -0.32
APOA1P02647 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.06□□□□□ -0.32
APOA1P02647 MIR7706-201ENST00000613747 67 ntBASIC13.06□□□□□ -0.32
APOA1P02647 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
APOA1P02647 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
APOA1P02647 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.06□□□□□ -0.32
APOA1P02647 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 AP002008.2-201ENST00000635926 4870 ntBASIC13.05□□□□□ -0.32
APOA1P02647 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 AC011498.7-201ENST00000624986 2027 ntBASIC13.05□□□□□ -0.32
APOA1P02647 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.05□□□□□ -0.32
APOA1P02647 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.05□□□□□ -0.32
APOA1P02647 KRT8P23-201ENST00000560090 1207 ntBASIC13.05□□□□□ -0.32
APOA1P02647 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.05□□□□□ -0.32
APOA1P02647 AC116407.3-201ENST00000623905 1129 ntBASIC13.05□□□□□ -0.32
APOA1P02647 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOA1P02647 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 NCLP1-201ENST00000445357 1963 ntBASIC13.05□□□□□ -0.32
APOA1P02647 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
APOA1P02647 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.05□□□□□ -0.32
APOA1P02647 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOA1P02647 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms