Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 TUBA3GP-201ENST00000410028 1325 ntBASIC6.27□□□□□ -1.41
USH2AO75445 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 TUBB2BP1-201ENST00000404155 871 ntBASIC6.27□□□□□ -1.41
USH2AO75445 MIR1249-201ENST00000408671 66 ntBASIC6.27□□□□□ -1.41
USH2AO75445 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC6.27□□□□□ -1.41
USH2AO75445 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC6.27□□□□□ -1.41
USH2AO75445 AC010202.1-201ENST00000551181 405 ntBASIC6.27□□□□□ -1.41
USH2AO75445 AL137028.2-201ENST00000614601 256 ntBASIC6.27□□□□□ -1.41
USH2AO75445 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC6.27□□□□□ -1.41
USH2AO75445 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC6.27□□□□□ -1.41
USH2AO75445 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 AC092135.3-201ENST00000624151 1846 ntBASIC6.27□□□□□ -1.41
USH2AO75445 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USH2AO75445 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 ACTG1P23-201ENST00000437653 1074 ntBASIC6.26□□□□□ -1.41
USH2AO75445 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 RPL30-213ENST00000523172 274 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC6.26□□□□□ -1.41
USH2AO75445 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USH2AO75445 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USH2AO75445 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 NLK-203ENST00000582037 1503 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AC099398.1-201ENST00000567919 2776 ntBASIC6.26□□□□□ -1.41
USH2AO75445 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AL391005.1-201ENST00000623953 2435 ntBASIC6.26□□□□□ -1.41
USH2AO75445 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AL365181.3-201ENST00000605886 3222 ntBASIC6.26□□□□□ -1.41
USH2AO75445 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AL596087.1-201ENST00000400979 1969 ntBASIC6.26□□□□□ -1.41
USH2AO75445 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 EEF1DP2-201ENST00000433698 843 ntBASIC6.26□□□□□ -1.41
USH2AO75445 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 KRT18P45-201ENST00000515347 1333 ntBASIC6.26□□□□□ -1.41
USH2AO75445 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms