Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 MTX1P1-201ENST00000440904 838 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 KLF2P1-201ENST00000447438 1042 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 HSPB1P2-201ENST00000448722 546 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 Z93015.1-201ENST00000451718 390 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 AC104506.1-201ENST00000609247 429 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 Z98259.2-201ENST00000641583 609 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 AL928921.2-201ENST00000641325 2442 ntBASIC12.99□□□□□ -0.33
TRAF3IP2O43734 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CICP16-201ENST00000502609 2813 ntBASIC12.98□□□□□ -0.33
TRAF3IP2O43734 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 RPSAP36-202ENST00000494591 1261 ntBASIC12.98□□□□□ -0.33
TRAF3IP2O43734 FAM86HP-204ENST00000513466 959 ntBASIC12.98□□□□□ -0.33
TRAF3IP2O43734 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.98□□□□□ -0.33
TRAF3IP2O43734 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 AC100827.2-201ENST00000563214 1194 ntBASIC12.98□□□□□ -0.33
TRAF3IP2O43734 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 TCAM1P-207ENST00000485295 1537 ntBASIC12.98□□□□□ -0.33
TRAF3IP2O43734 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRAF3IP2O43734 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAF3IP2O43734 AC067750.1-201ENST00000608826 6545 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms