Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
LAMB4A4D0S4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LAMB4A4D0S4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.83■□□□□ 0.45
LAMB4A4D0S4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 AL109809.1-201ENST00000418979 1367 ntBASIC17.83■□□□□ 0.44
LAMB4A4D0S4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.83■□□□□ 0.44
LAMB4A4D0S4 AC090643.2-201ENST00000623442 2029 ntBASIC17.83■□□□□ 0.44
LAMB4A4D0S4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 AC016397.2-201ENST00000624848 1985 ntBASIC17.83■□□□□ 0.44
LAMB4A4D0S4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
LAMB4A4D0S4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 TCAM1P-207ENST00000485295 1537 ntBASIC17.82■□□□□ 0.44
LAMB4A4D0S4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 AK2P2-201ENST00000439142 405 ntBASIC17.82■□□□□ 0.44
LAMB4A4D0S4 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.82■□□□□ 0.44
LAMB4A4D0S4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
LAMB4A4D0S4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 FO393412.1-201ENST00000619841 382 ntBASIC17.81■□□□□ 0.44
LAMB4A4D0S4 MIR6746-201ENST00000620971 63 ntBASIC17.81■□□□□ 0.44
LAMB4A4D0S4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 AL135901.1-201ENST00000451812 333 ntBASIC17.81■□□□□ 0.44
LAMB4A4D0S4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 AC138466.4-201ENST00000623965 852 ntBASIC17.81■□□□□ 0.44
LAMB4A4D0S4 AC026336.4-201ENST00000624565 1050 ntBASIC17.81■□□□□ 0.44
LAMB4A4D0S4 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LAMB4A4D0S4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LAMB4A4D0S4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms