Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 E2F3P2-201ENST00000447755 1422 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 CSF2RBP1-201ENST00000447905 391 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 GPR53P-205ENST00000457298 1084 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC119751.2-201ENST00000504529 210 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC100850.1-201ENST00000506768 649 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC027237.1-201ENST00000560942 655 ntBASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCDC162PA2VCL2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AC067750.1-201ENST00000608826 6545 ntBASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 HLA-V-201ENST00000429037 534 ntBASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AC022210.1-201ENST00000449856 793 ntBASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC162PA2VCL2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms