Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC009477.1-201ENST00000452936 217 ntBASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC66A2RUB6 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC055811.4-201ENST00000624039 1754 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 TREML5P-201ENST00000421694 576 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC241585.1-201ENST00000433527 519 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AL353779.1-201ENST00000434793 351 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 FAM86GP-201ENST00000448322 971 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC027796.2-201ENST00000575326 344 ntBASIC15.91■□□□□ 0.14
CCDC66A2RUB6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC66A2RUB6 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms