Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 PDIA3P2-201ENST00000428073 158 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 RNA5SP423-201ENST00000517127 109 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC134698.3-201ENST00000523880 214 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 RTN3P1-201ENST00000536295 711 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC124068.2-201ENST00000569473 1109 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AL353770.1-201ENST00000614915 403 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 FRMPD2B-201ENST00000431305 1347 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 MYADML-201ENST00000474610 2147 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 KRT8P19-201ENST00000551916 1455 ntBASIC9.98□□□□□ -0.81
LINC00588Q9Y4M8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AGGF1P1-201ENST00000509500 2073 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 HLA-DQB2-229ENST00000411527 1059 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 TSPY25P-201ENST00000429463 745 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 OR2R1P-201ENST00000441404 914 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 ST13P19-201ENST00000442505 1124 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC116345.2-201ENST00000512837 523 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC079328.1-201ENST00000560358 952 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 MIR3188-201ENST00000583494 85 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC012044.1-201ENST00000603431 297 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AF254983.2-201ENST00000612331 135 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 AC079336.7-201ENST00000623428 1078 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 CICP4-201ENST00000447359 2812 ntBASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00588Q9Y4M8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms