Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
LRIT1Q9P2V4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AP000356.3-201ENST00000382243 753 ntBASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AC027237.1-201ENST00000560942 655 ntBASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 COX6A1P2-201ENST00000620597 330 ntBASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AL805961.1-201ENST00000642026 753 ntBASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRIT1Q9P2V4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AC098935.1-201ENST00000446057 611 ntBASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms