Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 XBP1P1-201ENST00000436573 652 ntBASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 BNIP3P42-201ENST00000454982 569 ntBASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 PGAM1P5-201ENST00000548011 764 ntBASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 BNIP3P29-201ENST00000598302 571 ntBASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AC011447.5-201ENST00000616168 564 ntBASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 AC009542.2-202ENST00000619004 1067 ntBASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
KLHL42Q9P2K6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 KRT18P36-201ENST00000411618 1276 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 VDAC1P1-201ENST00000439229 848 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 RPL18P13-201ENST00000478088 569 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AC021723.1-201ENST00000486306 515 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 HLA-J-204ENST00000495278 958 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AL512310.5-201ENST00000551999 515 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 AC022748.3-201ENST00000621828 275 ntBASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
KLHL42Q9P2K6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms