Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AC012513.2-201ENST00000441511 1137 ntBASIC13.16□□□□□ -0.3
CHD8Q9HCK8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AL158032.2-201ENST00000616818 195 ntBASIC13.16□□□□□ -0.3
CHD8Q9HCK8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 MTHFR-217ENST00000641820 1569 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 HSD3BP1-201ENST00000286193 1111 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PHBP18-201ENST00000546648 813 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 MIR5091-201ENST00000578707 93 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 KF455155.1-201ENST00000604493 303 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AL596087.1-201ENST00000400979 1969 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PHBP3-201ENST00000412562 819 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PLAC9P1-203ENST00000440031 223 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ATP5G1P7-201ENST00000444398 400 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CHCHD2P6-201ENST00000454346 447 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC113398.1-201ENST00000464124 406 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 FAM187B2P-201ENST00000577135 713 ntBASIC13.15□□□□□ -0.3
CHD8Q9HCK8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CHD8Q9HCK8 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CHD8Q9HCK8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
CHD8Q9HCK8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.15□□□□□ -0.31
CHD8Q9HCK8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CHD8Q9HCK8 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC13.15□□□□□ -0.31
CHD8Q9HCK8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CHD8Q9HCK8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms