Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 STOM-202ENST00000347359 870 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 RPL37AP1-201ENST00000412502 279 ntBASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SND1-IT1Q9HBX3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC011840.2-201ENST00000563063 1520 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 FDX1P1-201ENST00000449115 551 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 RN7SL618P-201ENST00000477850 296 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms