Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 HIST2H2BB-201ENST00000449108 381 ntBASIC13.95□□□□□ -0.18
BRF2Q9HAW0 COX20P2-201ENST00000452636 358 ntBASIC13.95□□□□□ -0.18
BRF2Q9HAW0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 AC008687.7-202ENST00000637404 953 ntBASIC13.95□□□□□ -0.18
BRF2Q9HAW0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
BRF2Q9HAW0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 AL022313.4-201ENST00000562756 2046 ntBASIC13.94□□□□□ -0.18
BRF2Q9HAW0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.94□□□□□ -0.18
BRF2Q9HAW0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BRF2Q9HAW0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AL157407.1-201ENST00000435784 904 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 KLF2P4-201ENST00000451959 1225 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CROCCP4-201ENST00000457096 498 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AP006547.1-201ENST00000563435 692 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms