Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC012044.1-201ENST00000603431 297 ntBASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RPAP1Q9BWH6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 KHSRPP1-201ENST00000427983 1768 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AL157407.1-201ENST00000435784 904 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AC008267.1-201ENST00000474858 1069 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SCARNA21-201ENST00000517026 139 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AL157813.1-201ENST00000612996 587 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AC011474.4-201ENST00000623523 2076 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 AC009093.10-201ENST00000641956 1442 ntBASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPAP1Q9BWH6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC092978.1-202ENST00000637590 1327 ntBASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC069218.1-201ENST00000435269 762 ntBASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AL645933.1-201ENST00000440087 609 ntBASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AC006122.1-201ENST00000493323 440 ntBASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 U62317.3-201ENST00000608319 855 ntBASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms