Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 C8orf49-201ENST00000525043 1968 ntBASIC14.36□□□□□ -0.11
NPAS2Q99743 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPAS2Q99743 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.36□□□□□ -0.11
NPAS2Q99743 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPAS2Q99743 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.36□□□□□ -0.11
NPAS2Q99743 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.36□□□□□ -0.11
NPAS2Q99743 MIR658-201ENST00000385210 100 ntBASIC14.36□□□□□ -0.11
NPAS2Q99743 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPAS2Q99743 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.36□□□□□ -0.11
NPAS2Q99743 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.36□□□□□ -0.11
NPAS2Q99743 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.36□□□□□ -0.11
NPAS2Q99743 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.36□□□□□ -0.11
NPAS2Q99743 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.36□□□□□ -0.11
NPAS2Q99743 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NPAS2Q99743 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.36□□□□□ -0.11
NPAS2Q99743 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.36□□□□□ -0.11
NPAS2Q99743 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPAS2Q99743 MIR6775-201ENST00000617557 69 ntBASIC14.36□□□□□ -0.11
NPAS2Q99743 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPAS2Q99743 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 AC111170.3-201ENST00000624282 2464 ntBASIC14.36□□□□□ -0.11
NPAS2Q99743 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPAS2Q99743 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NPAS2Q99743 TCAM1P-207ENST00000485295 1537 ntBASIC14.36□□□□□ -0.11
NPAS2Q99743 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NPAS2Q99743 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AP001889.1-201ENST00000525414 633 ntBASIC14.35□□□□□ -0.11
NPAS2Q99743 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.35□□□□□ -0.11
NPAS2Q99743 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 MIR6805-201ENST00000615055 62 ntBASIC14.35□□□□□ -0.11
NPAS2Q99743 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPAS2Q99743 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPAS2Q99743 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms