Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TREHP1-201ENST00000531328 465 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AC018846.1-201ENST00000568231 183 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AL512324.3-201ENST00000619383 882 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 AL109924.4-201ENST00000623089 670 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 AC009452.1-201ENST00000640823 606 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 KRT18P9-201ENST00000604826 1300 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AC009093.2-202ENST00000620513 2079 ntBASIC14.83□□□□□ -0.04
PHOX2BQ99453 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHOX2BQ99453 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.83□□□□□ -0.04
PHOX2BQ99453 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 FAM58BP-201ENST00000439056 645 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC053503.3-201ENST00000448375 114 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AL049829.1-201ENST00000465411 156 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC023906.1-201ENST00000486386 453 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 BCL2L12P1-201ENST00000508390 733 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC144521.1-201ENST00000607148 956 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC055811.4-201ENST00000624039 1754 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC123912.3-201ENST00000600907 1367 ntBASIC14.82□□□□□ -0.04
PHOX2BQ99453 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.82□□□□□ -0.04
PHOX2BQ99453 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PHOX2BQ99453 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PHOX2BQ99453 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.81□□□□□ -0.04
PHOX2BQ99453 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms