Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 LINC01230-201ENST00000625222 3017 ntBASIC12.11□□□□□ -0.47
GAFA1Q96PS6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
GAFA1Q96PS6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 FAM90A7P-201ENST00000382628 1395 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 FAM90A23P-201ENST00000400136 1395 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 FAM86MP-201ENST00000340703 885 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 HLA-J-204ENST00000495278 958 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC092658.1-201ENST00000505836 891 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC126915.1-201ENST00000522847 1038 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC124068.2-201ENST00000569473 1109 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AL118558.3-201ENST00000607414 1079 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AC068587.8-201ENST00000641239 219 ntBASIC12.1□□□□□ -0.47
GAFA1Q96PS6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.1□□□□□ -0.47
GAFA1Q96PS6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
GAFA1Q96PS6 AC016397.2-201ENST00000624848 1985 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms