Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLDN23Q96B33 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 GEMIN8P4-201ENST00000380526 729 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 FAM21EP-201ENST00000417804 985 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 AP000244.1-201ENST00000424582 201 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 AC023968.2-201ENST00000560593 1049 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 AC104506.1-201ENST00000609247 429 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 AC011270.2-201ENST00000624293 2550 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.29□□□□□ -0.12
CLDN23Q96B33 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CLDN23Q96B33 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CLDN23Q96B33 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AC073210.1-201ENST00000414799 232 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AL080243.1-201ENST00000423293 1060 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 STK24P1-201ENST00000455035 1291 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 RN7SL147P-201ENST00000487345 298 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AL365181.1-201ENST00000564032 1828 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AC138761.6-201ENST00000583997 1423 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AL136982.5-201ENST00000605222 294 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 PTPN20CP-201ENST00000614090 920 ntBASIC14.28□□□□□ -0.12
CLDN23Q96B33 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLDN23Q96B33 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN23Q96B33 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms