Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.85□□□□□ -0.19
TM9SF4Q92544 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
TM9SF4Q92544 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TM9SF4Q92544 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 AC005252.3-201ENST00000623855 2258 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 NKAIN1P1-201ENST00000435754 582 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 FAM58BP-201ENST00000439056 645 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 RN7SL11P-201ENST00000471305 293 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 RN7SL720P-201ENST00000488178 304 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ST20-AS1-201ENST00000560255 4223 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 CLUHP2-201ENST00000426660 1303 ntBASIC13.84□□□□□ -0.19
TM9SF4Q92544 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TM9SF4Q92544 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TM9SF4Q92544 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.83□□□□□ -0.19
TM9SF4Q92544 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TM9SF4Q92544 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TM9SF4Q92544 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TM9SF4Q92544 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TM9SF4Q92544 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TM9SF4Q92544 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.83□□□□□ -0.19
TM9SF4Q92544 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TM9SF4Q92544 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.83□□□□□ -0.19
TM9SF4Q92544 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 AC104457.1-201ENST00000401024 814 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 CYP46A4P-201ENST00000414953 267 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 GHSR-202ENST00000427970 912 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TM9SF4Q92544 AC100850.1-201ENST00000506768 649 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.83□□□□□ -0.2
TM9SF4Q92544 AC013355.1-201ENST00000562625 723 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 DUX4L47-201ENST00000566374 394 ntBASIC13.83□□□□□ -0.2
TM9SF4Q92544 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms