Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 AL162726.2-201ENST00000438986 1017 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 MYADML-201ENST00000474610 2147 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ENPP7P5-201ENST00000541031 1031 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 TP53TG3HP-202ENST00000569755 579 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 SPDYE22P-201ENST00000582158 798 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CTBP2P3-201ENST00000585629 1255 ntBASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
RTN4IP1Q8WWV3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AC027612.1-201ENST00000445234 2395 ntBASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 CRB3P1-201ENST00000449338 276 ntBASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 WASH4P-201ENST00000564273 1246 ntBASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PRSS30P-206ENST00000641773 873 ntBASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 AC073548.1-201ENST00000624088 1882 ntBASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTN4IP1Q8WWV3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms