Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 AC008026.2-201ENST00000495438 348 ntBASIC17.34■□□□□ 0.37
SNED1Q8TER0 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 AC018529.2-202ENST00000611482 3087 ntBASIC17.34■□□□□ 0.37
SNED1Q8TER0 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNED1Q8TER0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNED1Q8TER0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNED1Q8TER0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SNED1Q8TER0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.33■□□□□ 0.37
SNED1Q8TER0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNED1Q8TER0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNED1Q8TER0 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNED1Q8TER0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SNED1Q8TER0 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNED1Q8TER0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNED1Q8TER0 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.33■□□□□ 0.37
SNED1Q8TER0 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.33■□□□□ 0.36
SNED1Q8TER0 OR51A9P-201ENST00000422578 911 ntBASIC17.33■□□□□ 0.36
SNED1Q8TER0 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.33■□□□□ 0.36
SNED1Q8TER0 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SNED1Q8TER0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNED1Q8TER0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 ENPP7P8-202ENST00000527856 1345 ntBASIC17.32■□□□□ 0.36
SNED1Q8TER0 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AF274858.1-201ENST00000406288 372 ntBASIC17.32■□□□□ 0.36
SNED1Q8TER0 KRT18P4-201ENST00000422599 1288 ntBASIC17.32■□□□□ 0.36
SNED1Q8TER0 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AL359091.4-201ENST00000610052 409 ntBASIC17.32■□□□□ 0.36
SNED1Q8TER0 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AL365181.1-201ENST00000564032 1828 ntBASIC17.32■□□□□ 0.36
SNED1Q8TER0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 MYADML-201ENST00000474610 2147 ntBASIC17.32■□□□□ 0.36
SNED1Q8TER0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.32■□□□□ 0.36
SNED1Q8TER0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNED1Q8TER0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.31■□□□□ 0.36
SNED1Q8TER0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.31■□□□□ 0.36
SNED1Q8TER0 AC092570.1-201ENST00000414446 469 ntBASIC17.31■□□□□ 0.36
SNED1Q8TER0 RN7SL128P-201ENST00000467883 305 ntBASIC17.31■□□□□ 0.36
SNED1Q8TER0 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.31■□□□□ 0.36
SNED1Q8TER0 AC026336.4-201ENST00000624565 1050 ntBASIC17.31■□□□□ 0.36
SNED1Q8TER0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNED1Q8TER0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNED1Q8TER0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms