Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 POP5-201ENST00000341039 913 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 HMGA1P2-201ENST00000430198 324 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 SAP18P2-201ENST00000434334 459 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 GULOP-201ENST00000454030 748 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 PEBP1P3-201ENST00000455475 548 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 RPSAP70-201ENST00000504462 864 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 COQ10BP2-201ENST00000513804 724 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ACTBP9-201ENST00000587663 1099 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 OR3A1-202ENST00000615105 966 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 CCL19-202ENST00000378800 414 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 NDUFB2P1-201ENST00000506966 295 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.43□□□□□ -0.9
ALMS1Q8TCU4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 RBP4-203ENST00000371469 814 ntTSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TPT1P9-201ENST00000413759 514 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CETN3-205ENST00000522842 664 ntTSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 RPL10P8-201ENST00000522888 313 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 MYADML-201ENST00000474610 2147 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC091951.1-201ENST00000512854 2465 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TUBB4AP1-201ENST00000450755 1325 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 GOLGA2P8-201ENST00000505201 779 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 PPY-202ENST00000587006 431 ntTSL 3 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms