Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC078875.1-201ENST00000431907 724 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC106794.1-201ENST00000506935 792 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC022217.1-201ENST00000521069 738 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC013355.1-201ENST00000562625 723 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AC092299.1-201ENST00000632679 757 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 AHCYP4-201ENST00000419201 1315 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 LAP3P2-201ENST00000454686 1454 ntBASIC12.85□□□□□ -0.35
ZIC4Q8N9L1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 MARK2P5-201ENST00000507649 634 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AP001258.2-201ENST00000529891 490 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AC021016.3-201ENST00000608367 477 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AL136295.7-201ENST00000619226 1200 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AC090386.2-201ENST00000623010 1039 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 AL161772.1-201ENST00000610494 4412 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZIC4Q8N9L1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC4Q8N9L1 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC4Q8N9L1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC4Q8N9L1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms