Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 BCYRN1-201ENST00000418539 200 ntBASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC044849.1-201ENST00000519737 1188 ntBASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 RN7SL163P-201ENST00000583100 276 ntBASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC009884.2-201ENST00000603110 324 ntBASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AL136295.7-201ENST00000619226 1200 ntBASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRIM48Q8IWZ4 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AC138028.6-201ENST00000616106 1482 ntBASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AC012441.2-201ENST00000444843 739 ntBASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AKR7A2P1-201ENST00000460134 915 ntBASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 ZNF767P-206ENST00000513792 565 ntBASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms