Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 AC002472.4-201ENST00000641915 272 ntBASIC15.71■□□□□ 0.11
HERC6Q8IVU3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.71■□□□□ 0.11
HERC6Q8IVU3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HERC6Q8IVU3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HERC6Q8IVU3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HERC6Q8IVU3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HERC6Q8IVU3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HERC6Q8IVU3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HERC6Q8IVU3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 FAM45BP-202ENST00000592932 1624 ntBASIC15.7■□□□□ 0.1
HERC6Q8IVU3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HERC6Q8IVU3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 RN7SKP109-201ENST00000410592 316 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms