Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 AC007551.1-201ENST00000457394 519 ntBASIC15.22■□□□□ 0.03
RFX6Q8HWS3 COX5BP1-201ENST00000507622 393 ntBASIC15.22■□□□□ 0.03
RFX6Q8HWS3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFX6Q8HWS3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 CU639417.3-201ENST00000624240 1404 ntBASIC15.21■□□□□ 0.03
RFX6Q8HWS3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 KRT90P-201ENST00000549264 1064 ntBASIC15.21■□□□□ 0.03
RFX6Q8HWS3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 AC006453.4-201ENST00000636949 1252 ntBASIC15.21■□□□□ 0.03
RFX6Q8HWS3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFX6Q8HWS3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 KRT8P28-201ENST00000433288 1390 ntBASIC15.21■□□□□ 0.02
RFX6Q8HWS3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.21■□□□□ 0.02
RFX6Q8HWS3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.21■□□□□ 0.02
RFX6Q8HWS3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 CD8B2-202ENST00000417670 633 ntBASIC15.2■□□□□ 0.02
RFX6Q8HWS3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.2■□□□□ 0.02
RFX6Q8HWS3 RN7SL713P-201ENST00000582127 302 ntBASIC15.2■□□□□ 0.02
RFX6Q8HWS3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms