Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 KRT18P2-201ENST00000447938 1258 ntBASIC12.18□□□□□ -0.46
ZNF546Q86UE3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AC034105.1-201ENST00000563488 319 ntBASIC12.18□□□□□ -0.46
ZNF546Q86UE3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 AC009474.1-201ENST00000455096 1565 ntBASIC12.18□□□□□ -0.46
ZNF546Q86UE3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZNF546Q86UE3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 MIR346-201ENST00000362234 95 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AL391647.1-201ENST00000395664 511 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 MRPL3P1-201ENST00000400109 1033 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SPDYE11-202ENST00000450699 704 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SLED1-202ENST00000512051 380 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 RNA5SP416-201ENST00000516838 111 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SPDYE9P-201ENST00000570642 692 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AC104692.2-201ENST00000603054 253 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SPDYE10P-202ENST00000612005 668 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 SPDYE8P-202ENST00000612377 668 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AC091812.2-201ENST00000619081 385 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AL513190.1-201ENST00000621254 727 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 AC027369.3-201ENST00000530465 3707 ntBASIC12.17□□□□□ -0.46
ZNF546Q86UE3 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ZNF546Q86UE3 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms