Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 HLA-K-203ENST00000430151 1046 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 COX20P2-201ENST00000452636 358 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ENPP7P5-201ENST00000541031 1031 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 AC105233.6-201ENST00000642093 218 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 AC004899.2-201ENST00000622993 3860 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 AC102953.2-201ENST00000609755 3026 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFPL4BQ6ZWI9 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 AL360270.3-201ENST00000609118 1348 ntBASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.19□□□□□ -0.3
RFPL4BQ6ZWI9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms