Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC090505.1-201ENST00000430515 1834 ntBASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 AC131212.3-201ENST00000624087 4219 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 KRT8P14-201ENST00000414254 1442 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 COX5BP8-201ENST00000416911 349 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 AC005225.4-201ENST00000557330 545 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 AC015936.2-201ENST00000593177 259 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 AC010319.3-201ENST00000597028 470 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 RPSAP52-203ENST00000622976 1023 ntBASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ATPAF1Q5TC12 NUTM2HP-201ENST00000442076 2498 ntBASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATPAF1Q5TC12 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms