Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CX3CL1P78423 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CX3CL1P78423 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CX3CL1P78423 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.84□□□□□ -0.51
CX3CL1P78423 COL6A4P2-202ENST00000504443 2753 ntBASIC11.84□□□□□ -0.51
CX3CL1P78423 AC099521.3-201ENST00000624251 2938 ntBASIC11.83□□□□□ -0.51
CX3CL1P78423 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CX3CL1P78423 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AL031595.1-201ENST00000623969 4709 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 AC020910.5-201ENST00000623668 1865 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 INE2-201ENST00000630399 1874 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 DMBT1P1-203ENST00000636837 4628 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 RN7SKP230-201ENST00000365642 335 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 FAM8A4P-201ENST00000435433 1213 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.83□□□□□ -0.52
CX3CL1P78423 CROCCP4-201ENST00000457096 498 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.83□□□□□ -0.52
CX3CL1P78423 KRT17P8-201ENST00000540749 863 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 AC078819.1-201ENST00000547454 765 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 AC012085.1-201ENST00000548270 765 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.83□□□□□ -0.52
CX3CL1P78423 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 AC006453.4-201ENST00000636949 1252 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CX3CL1P78423 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 AL356585.2-201ENST00000625078 2396 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CX3CL1P78423 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CX3CL1P78423 MST1P2-201ENST00000457982 2291 ntBASIC11.83□□□□□ -0.52
CX3CL1P78423 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 AL136172.1-201ENST00000598590 1394 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 PDIA3P1-201ENST00000471856 1510 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms