Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.8□□□□□ -0.2
RAE1P78406 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.8□□□□□ -0.2
RAE1P78406 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.8□□□□□ -0.2
RAE1P78406 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.8□□□□□ -0.2
RAE1P78406 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RAE1P78406 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.8□□□□□ -0.2
RAE1P78406 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.8□□□□□ -0.2
RAE1P78406 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.8□□□□□ -0.2
RAE1P78406 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAE1P78406 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 USP17L6P-201ENST00000382470 1197 ntBASIC13.79□□□□□ -0.2
RAE1P78406 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.79□□□□□ -0.2
RAE1P78406 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.79□□□□□ -0.2
RAE1P78406 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.79□□□□□ -0.2
RAE1P78406 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.79□□□□□ -0.2
RAE1P78406 RAB43P1-201ENST00000561790 589 ntBASIC13.79□□□□□ -0.2
RAE1P78406 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 BAP1-211ENST00000615113 489 ntBASIC13.79□□□□□ -0.2
RAE1P78406 MIR6775-201ENST00000617557 69 ntBASIC13.79□□□□□ -0.2
RAE1P78406 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.79□□□□□ -0.2
RAE1P78406 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAE1P78406 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.79□□□□□ -0.2
RAE1P78406 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 FAM90A12P-201ENST00000519497 2375 ntBASIC13.78□□□□□ -0.2
RAE1P78406 FAM90A24P-201ENST00000520792 2369 ntBASIC13.78□□□□□ -0.2
RAE1P78406 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAE1P78406 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.78□□□□□ -0.2
RAE1P78406 AC099336.1-201ENST00000417053 1171 ntBASIC13.78□□□□□ -0.2
RAE1P78406 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RAE1P78406 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms