Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CDC42P60953 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 AL365181.3-201ENST00000605886 3222 ntBASIC13.41□□□□□ -0.26
CDC42P60953 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.41□□□□□ -0.26
CDC42P60953 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CDC42P60953 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CDC42P60953 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 AL139400.1-201ENST00000366220 510 ntBASIC13.4□□□□□ -0.26
CDC42P60953 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 AC114501.2-201ENST00000439631 535 ntBASIC13.4□□□□□ -0.26
CDC42P60953 FAM86LP-201ENST00000478302 853 ntBASIC13.4□□□□□ -0.26
CDC42P60953 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 AC131206.1-201ENST00000538078 1211 ntBASIC13.4□□□□□ -0.26
CDC42P60953 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.4□□□□□ -0.26
CDC42P60953 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 AL391069.4-201ENST00000609583 481 ntBASIC13.4□□□□□ -0.26
CDC42P60953 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CDC42P60953 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CDC42P60953 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDC42P60953 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDC42P60953 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDC42P60953 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDC42P60953 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CDC42P60953 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 RPSAP43-201ENST00000402237 625 ntBASIC13.39□□□□□ -0.27
CDC42P60953 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC42P60953 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms