Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP4BP1P59074 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHMP4BP1P59074 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP4BP1P59074 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP4BP1P59074 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 INTS4P1-203ENST00000641008 3683 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 ACTG1P2-201ENST00000415776 1125 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 HINT2P1-201ENST00000419438 481 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 ACTG1P11-201ENST00000425411 1125 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 RN7SL720P-201ENST00000488178 304 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 DUX4L47-201ENST00000566374 394 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 RN7SL774P-201ENST00000577467 290 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 AC091812.3-201ENST00000621362 345 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 AC004899.1-201ENST00000424687 1714 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 AC027601.5-201ENST00000624065 2482 ntBASIC16.75■□□□□ 0.27
CHMP4BP1P59074 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP4BP1P59074 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.74■□□□□ 0.27
CHMP4BP1P59074 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 RN7SL769P-201ENST00000469386 295 ntBASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AL358472.3-201ENST00000608147 415 ntBASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AL023803.2-201ENST00000620080 638 ntBASIC16.74■□□□□ 0.27
CHMP4BP1P59074 AL603764.1-201ENST00000636452 321 ntBASIC16.74■□□□□ 0.27
CHMP4BP1P59074 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP4BP1P59074 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms