Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
WNT3AP56704 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.74□□□□□ -0.05
WNT3AP56704 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.74□□□□□ -0.05
WNT3AP56704 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
WNT3AP56704 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
WNT3AP56704 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
WNT3AP56704 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 TCAM1P-207ENST00000485295 1537 ntBASIC14.73□□□□□ -0.05
WNT3AP56704 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
WNT3AP56704 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.73□□□□□ -0.05
WNT3AP56704 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.73□□□□□ -0.05
WNT3AP56704 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.73□□□□□ -0.05
WNT3AP56704 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
WNT3AP56704 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
WNT3AP56704 AC104506.1-201ENST00000609247 429 ntBASIC14.73□□□□□ -0.05
WNT3AP56704 Z98259.2-201ENST00000641583 609 ntBASIC14.73□□□□□ -0.05
WNT3AP56704 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
WNT3AP56704 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.73□□□□□ -0.05
WNT3AP56704 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
WNT3AP56704 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
WNT3AP56704 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
WNT3AP56704 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
WNT3AP56704 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
WNT3AP56704 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
WNT3AP56704 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
WNT3AP56704 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms