Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CMC4P56277 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CMC4P56277 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 MIR1908-201ENST00000410394 80 ntBASIC10.87□□□□□ -0.67
CMC4P56277 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 AC011742.3-201ENST00000439053 820 ntBASIC10.87□□□□□ -0.67
CMC4P56277 AC006033.1-201ENST00000440505 426 ntBASIC10.87□□□□□ -0.67
CMC4P56277 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CMC4P56277 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC10.87□□□□□ -0.67
CMC4P56277 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.87□□□□□ -0.67
CMC4P56277 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.87□□□□□ -0.67
CMC4P56277 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.87□□□□□ -0.67
CMC4P56277 INTS4P1-203ENST00000641008 3683 ntBASIC10.87□□□□□ -0.67
CMC4P56277 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.87□□□□□ -0.67
CMC4P56277 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 AC064801.2-201ENST00000625052 1303 ntBASIC10.86□□□□□ -0.67
CMC4P56277 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 REXO1L6P-201ENST00000603433 1515 ntBASIC10.86□□□□□ -0.67
CMC4P56277 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.86□□□□□ -0.67
CMC4P56277 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CMC4P56277 KRT8P13-201ENST00000463294 1010 ntBASIC10.86□□□□□ -0.67
CMC4P56277 OARD1-212ENST00000482515 832 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 AC091804.1-201ENST00000486888 567 ntBASIC10.86□□□□□ -0.67
CMC4P56277 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC10.86□□□□□ -0.67
CMC4P56277 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.86□□□□□ -0.67
CMC4P56277 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.86□□□□□ -0.67
CMC4P56277 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms