Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ZACNP1-201ENST00000612259 710 ntBASIC15.04■□□□□ -0
ATXN3P54252 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
ATXN3P54252 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.04■□□□□ -0
ATXN3P54252 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.04■□□□□ -0
ATXN3P54252 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.04■□□□□ -0
ATXN3P54252 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ATXN3P54252 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.04■□□□□ -0
ATXN3P54252 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ATXN3P54252 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.03■□□□□ -0
ATXN3P54252 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.03■□□□□ -0
ATXN3P54252 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ATXN3P54252 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.03■□□□□ -0
ATXN3P54252 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.03■□□□□ -0
ATXN3P54252 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.03■□□□□ -0
ATXN3P54252 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.03■□□□□ -0
ATXN3P54252 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.03■□□□□ -0
ATXN3P54252 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
ATXN3P54252 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.03■□□□□ -0
ATXN3P54252 AC025181.2-201ENST00000606994 802 ntBASIC15.03■□□□□ -0
ATXN3P54252 AC100757.4-201ENST00000626934 759 ntBASIC15.03■□□□□ -0
ATXN3P54252 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
ATXN3P54252 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
ATXN3P54252 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.03■□□□□ -0
ATXN3P54252 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.03■□□□□ -0
ATXN3P54252 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ATXN3P54252 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 KRT8P4-201ENST00000509735 1454 ntBASIC15.02■□□□□ -0
ATXN3P54252 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 ZBED1P1-201ENST00000502364 1930 ntBASIC15.02■□□□□ -0
ATXN3P54252 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ATXN3P54252 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 AL139094.1-201ENST00000405549 1188 ntBASIC15.02■□□□□ -0
ATXN3P54252 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.02■□□□□ -0
ATXN3P54252 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.02■□□□□ -0
ATXN3P54252 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.02■□□□□ -0
ATXN3P54252 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.02■□□□□ -0
ATXN3P54252 AC134698.3-201ENST00000523880 214 ntBASIC15.02■□□□□ -0
ATXN3P54252 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.02■□□□□ -0
ATXN3P54252 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATXN3P54252 MIR3907-201ENST00000579424 151 ntBASIC15.02■□□□□ -0
ATXN3P54252 RN7SL713P-201ENST00000582127 302 ntBASIC15.02■□□□□ -0
ATXN3P54252 AL023803.2-201ENST00000620080 638 ntBASIC15.02■□□□□ -0
ATXN3P54252 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.02■□□□□ -0
ATXN3P54252 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.02□□□□□ -0.01
ATXN3P54252 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ATXN3P54252 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATXN3P54252 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.02□□□□□ -0.01
ATXN3P54252 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms